Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2980

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2980: 11348 - KOG3140 Predicted membrane protein, at 23 to 1444 11348

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1 + 0.2
1 + -0.7
1 + 0.3
21 + 2.1
21 + -0.1
21 + -0.3
41 + 1.2
42 + -0.0
44 + 0.9
79 - 1.9
79 + -3.1
149 - 1.1
264 + 11348 mRNA_2980 0.17 -0.5
266 - 11348 mRNA_2980 0.17 -0.0
338 - 11348 mRNA_2980 0.22 0.0
341 + 11348 mRNA_2980 0.22 0.7
454 - 11348 mRNA_2980 0.30 0.8
484 - 11348 mRNA_2980 0.32 0.5
489 - 11348 mRNA_2980 0.33 -0.6
491 + 11348 mRNA_2980 0.33 -0.3
507 + 11348 mRNA_2980 0.34 0.9
510 + 11348 mRNA_2980 0.34 0.1
516 - 11348 mRNA_2980 0.35 3.9
654 + 11348 mRNA_2980 0.44 -0.1
719 + 11348 mRNA_2980 0.49 1.2
1,007 + 11348 mRNA_2980 0.69 -0.1
1,048 - 11348 mRNA_2980 0.72 3.0
1,218 - 11348 mRNA_2980 0.84 0.9
1,248 + 11348 mRNA_2980 0.86 -0.8
1,364 + 1.9
1,374 - 1.1
1,401 + -0.5
1,452 + 0.7
1,488 - -0.2
1,503 + -0.4
1,513 + 0.7
1,515 - 0.5
1,551 + -0.7
1,634 + 0.8
1,635 + 0.5
1,657 + 1.2
1,668 + 0.8
1,805 - -1.0
1,805 + -1.4
1,818 + 0.3
1,882 + -0.2
1,934 + 0.7
1,948 + 1.2
1,949 - 0.1
1,974 + 0.2
1,992 + -0.1
1,992 + -0.5
1,993 + 0.2
2,011 + 0.5
2,082 + 0.0
2,084 - -1.2
2,086 + -1.8
2,086 + 2.8
2,086 + 0.4
2,095 + 0.2
2,097 - 2.0
2,098 + 1.7
2,115 + 1.1
2,117 + -1.2
2,120 + -0.9
2,121 - 0.5
2,121 - 1.8
2,125 - 0.5
2,126 + 1.1
2,131 + -1.6
2,131 + 0.3
2,131 + -0.1
2,133 + -0.3
2,243 + 1.4
2,265 + 1.5
2,301 + 1.4
2,320 + 1.6
2,324 - -0.6
2,357 + -1.1