Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2958

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2957: 11325 - Hypothetical Protein, at 645332 to 646636 11325 mRNA_2958: 11326 - K17907 ATG9 autophagy-related protein 9, at 647495 to 650461 11326

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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646,603 + -1.7
646,635 + -3.4
646,744 - 2.2
646,747 + -0.4
646,821 - 0.4
646,894 - 0.0
647,166 + -0.1
647,168 - -1.1
647,213 + -0.9
647,321 - 2.8
647,607 - -1.9
647,612 - -1.0
647,612 - -0.4
647,612 - -0.4
647,612 - 2.7
647,624 - -0.8
647,635 - -2.3
647,763 - -0.0
647,767 + -1.7
648,061 + 11326 mRNA_2958 0.19 -0.1
648,241 + 11326 mRNA_2958 0.25 -1.3
648,369 - 11326 mRNA_2958 0.29 -1.6
648,509 + 11326 mRNA_2958 0.34 -0.0
648,754 - 11326 mRNA_2958 0.42 -0.9
649,221 + 11326 mRNA_2958 0.58 -0.9
649,260 + 11326 mRNA_2958 0.59 -1.0
649,369 + 11326 mRNA_2958 0.63 -1.1
649,649 - 11326 mRNA_2958 0.73 -0.8
649,652 - 11326 mRNA_2958 0.73 -0.5
650,273 + -1.7
650,377 - -0.5
650,566 + 0.3
650,688 - -0.9
651,118 + -0.5
651,134 - 0.1
651,142 + 0.3
651,289 + 0.4
651,299 + -1.4
651,386 + -0.4
651,447 + 0.3
651,450 - -0.6