Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2936

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2936: 11304 - Hypothetical Protein, at 589318 to 590178 11304 mRNA_2937: 11305 - K14521 NAT10, KRE33 N-acetyltransferase 10, at 591164 to 595198 11305

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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588,572 - 0.4
588,689 + -0.1
588,849 - 1.3
588,858 - -1.2
588,903 + -0.6
588,990 - -1.5
588,999 - 0.5
589,007 + -2.8
589,035 + 0.3
589,048 - 0.5
589,051 + 0.7
589,054 + -0.0
589,057 - -2.0
589,058 - 1.4
589,060 - 0.5
589,067 - 0.0
589,071 + 1.0
589,071 + 1.1
589,072 + -0.7
589,076 + 0.9
589,077 + -2.5
589,078 - 0.4
589,079 + -1.2
589,079 - 0.6
589,080 + -2.2
589,081 - 0.3
589,089 + -0.2
589,096 + 1.2
589,098 - -0.9
589,103 - 1.1
589,167 + -1.0
589,191 - 1.2
589,220 + -1.7
589,232 - -0.0
589,248 + 0.4
589,714 + 11304 mRNA_2936 0.46 0.1
589,728 - 11304 mRNA_2936 0.48 -0.7
589,813 + 11304 mRNA_2936 0.57 -0.5
589,912 + 11304 mRNA_2936 0.69 0.7
589,952 + 11304 mRNA_2936 0.74 -0.5
590,104 + -2.6
590,114 - 0.0
590,568 + -1.1
590,684 + -0.0
590,695 + 2.7
590,802 + 0.9
590,821 + 0.4
590,823 + -0.1
590,857 + -1.1
590,859 + 1.6
590,878 + 0.6
591,003 - -1.5
591,023 - -0.3
591,025 - 1.7
591,031 - -2.4