Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2862

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2861: 11229 - KOG4754 Predicted phosphoglycerate mutase, at 388346 to 389336 11229 mRNA_2862: 11230 - PRINTS-Proline rich extensin signature-PR01217, at 389979 to 392232 11230 mRNA_2863: 11231 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 392445 to 393702 11231

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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389,476 + -1.2
389,498 - -0.2
389,499 + -0.6
389,501 + 1.3
389,536 + -0.6
389,542 + 2.0
389,624 + -0.4
389,650 - -0.3
389,651 - 0.1
389,658 - -0.3
389,779 - 2.1
389,934 - 0.4
389,944 - 0.4
390,077 - -2.9
390,567 - 11230 mRNA_2862 0.26 0.8
390,680 - 11230 mRNA_2862 0.31 -1.8
391,259 + 11230 mRNA_2862 0.57 0.1
391,786 - 11230 mRNA_2862 0.80 -2.4
391,975 + 11230 mRNA_2862 0.89 0.7
392,118 + 1.5
392,543 + -1.4
392,698 + 11231 mRNA_2863 0.20 0.2
393,217 + 11231 mRNA_2863 0.61 -0.5
393,220 - 11231 mRNA_2863 0.62 -2.1