Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2860

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2859: 11227 - Hypothetical Protein, at 385402 to 386720 11227 mRNA_2860: 11228 - K11811 arsH arsenical resistance protein ArsH, at 387053 to 388029 11228 mRNA_2861: 11229 - KOG4754 Predicted phosphoglycerate mutase, at 388346 to 389336 11229

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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386,198 + 11227 mRNA_2859 0.60 0.1
386,476 - 11227 mRNA_2859 0.81 0.9
386,606 + 1.2
386,710 - -0.5
386,731 + -2.3
386,760 - 0.1
386,761 - 2.2
386,766 + -0.6
386,768 - 0.6
386,771 - 1.9
386,775 - -0.1
386,776 + -0.0
386,791 - -0.4
386,793 + 0.8
386,793 + 0.0
386,794 + -0.2
386,795 - 0.2
386,815 + 1.0
386,816 + 0.7
386,834 + 0.2
386,846 + -1.7
386,850 + 0.1
386,861 + 0.4
386,875 + -0.3
386,975 + -0.1
386,992 - -1.4
387,132 + 0.8
387,436 + 11228 mRNA_2860 0.39 1.7
387,721 + 11228 mRNA_2860 0.68 0.3
388,269 - 2.1
388,318 + 1.4
388,346 + 0.6
388,428 - 0.9
388,445 - 11229 mRNA_2861 0.10 1.1