Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2841

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2840: 11208 - KOG4178 Soluble epoxide hydrolase, at 338126 to 339492 11208 mRNA_2841: 11209 - KOG3290 Peroxisomal phytanoyl-CoA hydroxylase, at 339851 to 340983 11209 mRNA_2842: 11210 - Hypothetical Protein, at 341749 to 343529 11210

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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338,862 + 11208 mRNA_2840 0.54 1.0
338,928 - 11208 mRNA_2840 0.59 -2.7
339,177 - 11208 mRNA_2840 0.77 -1.0
339,197 - 11208 mRNA_2840 0.78 0.1
339,313 + 11208 mRNA_2840 0.87 -1.5
339,494 + -1.1
339,515 + -1.5
339,621 + 0.1
339,632 - -1.7
339,643 + -1.4
339,646 + 0.4
339,748 - -1.9
339,801 - 1.3
339,807 - 1.1
339,890 - 1.3
339,928 - 0.3
339,948 + -0.3
339,951 - -0.4
339,961 - -0.9
340,069 - 11209 mRNA_2841 0.19 0.3
340,086 - 11209 mRNA_2841 0.21 1.2
340,101 - 11209 mRNA_2841 0.22 -1.0
340,240 + 11209 mRNA_2841 0.34 -1.6
340,396 - 11209 mRNA_2841 0.48 -0.4
340,398 - 11209 mRNA_2841 0.48 -0.7
340,531 + 11209 mRNA_2841 0.60 -0.5
340,672 + 11209 mRNA_2841 0.72 -0.2
341,047 - -0.1
341,054 + 0.1
341,127 - -0.4
341,144 + -0.3
341,278 + -1.5
341,785 - 0.3