Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2808

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2807: 11175 - K11485 MTF2, PCL2 polycomb-like protein 2, at 267312 to 269571 11175 mRNA_2808: 11176 - KOG4539 Uncharacterized conserved protein, at 269906 to 271117 11176 mRNA_2809: 11177 - K08596 SENP7 sentrin-specific protease 7, at 271552 to 278521 11177

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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269,167 + 11175 mRNA_2807 0.82 -1.2
269,190 + 11175 mRNA_2807 0.83 -0.3
269,315 + 11175 mRNA_2807 0.89 0.5
269,330 + 11175 mRNA_2807 0.89 -0.3
269,456 + -0.7
269,480 - 1.5
269,489 - -0.3
269,603 - 1.1
269,734 + 0.0
269,759 + -1.6
269,822 + -1.3
269,876 - 0.5
269,879 - 1.2
269,910 + 0.1
269,913 - -0.6
270,045 - 11176 mRNA_2808 0.11 1.3
270,182 + 11176 mRNA_2808 0.23 1.9
270,184 - 11176 mRNA_2808 0.23 -0.4
270,206 - 11176 mRNA_2808 0.25 -0.2
270,469 + 11176 mRNA_2808 0.46 0.1
270,594 + 11176 mRNA_2808 0.57 -0.7
270,639 - 11176 mRNA_2808 0.60 -1.5
271,064 + -2.1
271,078 + 0.8
271,204 - 0.7
271,223 + 0.2
271,356 + 0.3
271,363 - 1.4
271,512 + 0.2
271,552 - -1.2
271,786 - 0.5