Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2775

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2774: 11142 - K02991 RP-S6e, RPS6 small subunit ribosomal protein S6e, at 180675 to 181907 11142 mRNA_2775: 11143 - KOG1646 40S ribosomal protein S6, at 182277 to 183930 11143 mRNA_2776: 11144 - K14292 TGS1 trimethylguanosine synthase, at 183989 to 185404 11144

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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182,070 - -1.1
182,071 + 0.6
182,079 - -1.0
182,080 - 0.5
182,083 + -1.6
182,087 + 0.1
182,110 + 1.8
182,153 - 1.5
182,257 + 1.7
182,261 - -0.1
182,593 - 11143 mRNA_2775 0.19 1.0
182,597 + 11143 mRNA_2775 0.19 -0.6
182,713 - 11143 mRNA_2775 0.26 -0.7
183,056 + 11143 mRNA_2775 0.47 -0.2
183,169 - 11143 mRNA_2775 0.54 1.6
183,291 - 11143 mRNA_2775 0.61 -1.1
183,360 + 11143 mRNA_2775 0.65 -1.3
183,410 + 11143 mRNA_2775 0.69 -0.4
183,868 + -0.2
183,993 - -0.2
184,277 + 11144 mRNA_2776 0.20 1.4
184,294 + 11144 mRNA_2776 0.22 0.3
184,446 + 11144 mRNA_2776 0.32 -0.6
184,585 + 11144 mRNA_2776 0.42 -0.1
184,597 - 11144 mRNA_2776 0.43 -0.4
184,880 + 11144 mRNA_2776 0.63 1.8
184,883 - 11144 mRNA_2776 0.63 -1.0