Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2738

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2738: 11106 - K20121 FNBP1 formin-binding protein 1, at 107722 to 109356 11106 mRNA_2739: 11107 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 109775 to 112160 11107

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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106,844 - -2.0
106,862 + -0.2
106,986 + -0.7
107,149 - 1.7
107,323 + -0.9
107,732 - -1.5
107,853 + -0.3
108,063 - 11106 mRNA_2738 0.21 -1.0
108,176 - 11106 mRNA_2738 0.28 -0.7
108,334 - 11106 mRNA_2738 0.37 2.5
108,561 + 11106 mRNA_2738 0.51 -0.9
108,604 + 11106 mRNA_2738 0.54 -1.6
108,647 - 11106 mRNA_2738 0.57 -2.7
108,728 - 11106 mRNA_2738 0.62 0.2
108,784 - 11106 mRNA_2738 0.65 -1.3
108,814 + 11106 mRNA_2738 0.67 0.2
108,872 + 11106 mRNA_2738 0.70 2.2
109,359 - 0.3
109,597 + 1.2
109,866 + 2.1
110,095 + 11107 mRNA_2739 0.13 1.2
110,170 - 11107 mRNA_2739 0.17 1.3
110,219 + 11107 mRNA_2739 0.19 0.3