Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2714

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2714: 11082 - KOG2477 Uncharacterized conserved protein, at 63364 to 66371 11082 mRNA_2715: 11083 - Hypothetical Protein, at 66913 to 70114 11083

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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62,378 + -0.6
62,383 - -0.6
62,389 + 0.9
62,390 - 0.9
62,396 - 0.3
62,398 - -0.4
62,399 - -0.2
62,406 + 0.9
62,407 + 0.1
62,410 + -0.6
62,413 + 0.7
62,416 + 0.1
62,422 + -0.5
62,427 + -0.1
62,428 - 0.8
62,432 + -0.1
62,505 - 0.8
62,512 - 0.7
62,515 - -1.0
62,533 + 0.5
62,536 - -1.1
62,546 + 2.7
62,557 + 0.9
62,564 - 1.0
62,565 + 1.9
62,567 - 0.2
62,696 + -0.6
62,699 + -1.7
62,709 + 0.7
62,710 - -0.5
62,711 - 1.2
62,724 + 1.9
62,726 - 0.4
62,731 + -0.7
62,741 + -1.7
62,743 - 0.2
62,752 - 0.3
62,786 - 0.6
62,790 - -1.7
62,790 - -0.5
62,792 - -0.3
62,796 + 0.0
62,807 - 0.8
62,815 - 2.0
62,819 + 0.5
62,831 + 1.8
62,843 + 2.5
62,882 - -0.6
62,882 + -0.7
62,897 - 0.9
62,899 + -0.0
62,919 - 0.2
62,919 + -0.6
62,920 + 1.0
62,922 + 0.5
62,930 - -0.0
62,930 + 1.2
62,934 + 2.0
62,935 + 1.8
63,003 + 0.2
63,109 - -0.8
63,124 - -0.1
63,124 + 1.1
63,137 + 1.2
63,223 - -2.2
63,283 - 1.6
64,443 - 11082 mRNA_2714 0.36 -1.2
64,445 - 11082 mRNA_2714 0.36 -0.8
64,768 - 11082 mRNA_2714 0.47 0.9
64,801 + 11082 mRNA_2714 0.48 2.0
64,921 - 11082 mRNA_2714 0.52 -1.0
65,158 - 11082 mRNA_2714 0.60 -0.6
65,192 - 11082 mRNA_2714 0.61 -2.0
65,256 + 11082 mRNA_2714 0.63 -1.0
66,052 - 11082 mRNA_2714 0.89 1.7
66,444 - -0.8
66,497 - 0.2
66,531 - -0.6
66,643 + 0.4
66,788 - 0.1
66,919 - 2.0
66,979 + 0.1
66,981 - -1.0