Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2710

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2709: 11077 - Hypothetical Protein, at 52775 to 54075 11077 mRNA_2710: 11078 - BLAST putative protein (N-terminal fragment) [Melanopsichiu..., at 54672 to 56113 11078 mRNA_2711: 11079 - K01098 CET1 polynucleotide 5'-triphosphatase, at 56930 to 58742 11079

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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53,693 + 11077 mRNA_2709 0.71 1.0
53,754 + 11077 mRNA_2709 0.75 1.4
53,989 - -1.0
54,277 + 0.2
54,287 + -0.0
54,291 - -1.1
54,299 + -1.2
54,421 - -0.3
54,473 - 1.3
54,563 - 0.4
54,566 - 0.1
54,567 + 0.7
54,572 + 0.1
54,582 + 0.4
54,595 - 1.0
55,036 - 11078 mRNA_2710 0.25 -0.0
55,074 - 11078 mRNA_2710 0.28 0.8
55,295 - 11078 mRNA_2710 0.43 -0.3
56,200 - 0.2
56,323 + 0.6
56,365 - 2.0
56,691 + -0.5