Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2674

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2673: 11041 - K10844 ERCC2, XPD DNA excision repair protein ERCC-2, at 734339 to 738341 11041 mRNA_2674: 11042 - Hypothetical Protein, at 738796 to 742591 11042

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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737,976 + -0.1
738,074 + -0.0
738,088 + -2.2
738,155 + 0.3
738,378 - -0.4
738,478 + 0.6
738,523 - -1.3
738,572 + 0.6
738,595 + 0.5
738,710 + -1.1
738,837 - 0.3
738,876 + 0.7
738,965 - 0.5
739,086 + -0.2
739,136 + 0.2
739,228 + 11042 mRNA_2674 0.11 0.3
739,245 - 11042 mRNA_2674 0.12 -0.9
739,265 - 11042 mRNA_2674 0.12 2.1
739,588 + 11042 mRNA_2674 0.21 -1.1
739,601 + 11042 mRNA_2674 0.21 0.9
739,857 + 11042 mRNA_2674 0.28 0.7
739,999 - 11042 mRNA_2674 0.32 -0.6
740,008 + 11042 mRNA_2674 0.32 1.0
740,012 + 11042 mRNA_2674 0.32 1.3
740,294 + 11042 mRNA_2674 0.39 0.3
740,456 + 11042 mRNA_2674 0.44 0.7
740,459 + 11042 mRNA_2674 0.44 -2.1
740,503 - 11042 mRNA_2674 0.45 0.1
740,585 - 11042 mRNA_2674 0.47 -0.7
741,123 + 11042 mRNA_2674 0.61 1.1
741,149 + 11042 mRNA_2674 0.62 0.7
741,195 - 11042 mRNA_2674 0.63 -0.3
741,199 + 11042 mRNA_2674 0.63 0.1
741,279 - 11042 mRNA_2674 0.65 -0.7
741,289 - 11042 mRNA_2674 0.66 0.2
741,435 - 11042 mRNA_2674 0.70 -0.5
741,481 - 11042 mRNA_2674 0.71 0.1
741,519 + 11042 mRNA_2674 0.72 -0.2
741,878 + 11042 mRNA_2674 0.81 0.3
742,326 - -1.0
742,334 - 1.1
742,338 + -0.0
742,390 - 0.5
742,638 + -0.3
742,664 - 0.7
743,026 + -0.6
743,045 - -0.7
743,048 + 0.6
743,067 + -0.0
743,223 + -0.2
743,317 - -1.5
743,354 + 0.1
743,365 - 0.5