Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2658

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2657: 11025 - K02155 ATPeV0C, ATP6L V-type H+-transporting ATPase 16kDa proteolipid subunit, at 695645 to 696729 11025 mRNA_2658: 11026 - BLAST transmembrane amino acid transporter protein [Rhizoct..., at 696995 to 699580 11026 mRNA_2659: 11027 - Hypothetical Protein, at 699650 to 700523 11027

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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696,754 + 0.7
696,768 + 0.2
696,771 + -1.5
696,772 + -0.1
696,781 + 0.3
696,792 + -0.0
696,794 - 0.7
696,910 + -0.9
697,087 + 0.6
697,229 + -0.1
697,374 + 11026 mRNA_2658 0.15 -0.1
697,404 - 11026 mRNA_2658 0.16 0.9
697,900 + 11026 mRNA_2658 0.35 0.2
698,099 + 11026 mRNA_2658 0.43 1.5
698,102 - 11026 mRNA_2658 0.43 -2.4
698,108 - 11026 mRNA_2658 0.43 -1.0
698,914 - 11026 mRNA_2658 0.74 1.2
699,258 - 11026 mRNA_2658 0.88 -1.0
699,387 - -0.0
699,531 + 0.2
699,737 + 0.5
699,747 - 11027 mRNA_2659 0.11 -0.2
699,831 - 11027 mRNA_2659 0.21 0.4
699,931 + 11027 mRNA_2659 0.32 0.7
699,933 - 11027 mRNA_2659 0.32 -0.2
699,973 + 11027 mRNA_2659 0.37 0.1
700,124 - 11027 mRNA_2659 0.54 0.7
700,125 + 11027 mRNA_2659 0.54 -0.2
700,259 + 11027 mRNA_2659 0.70 0.9
700,399 - 11027 mRNA_2659 0.86 0.8
700,410 - 11027 mRNA_2659 0.87 0.9
700,552 + -2.0
700,554 - 0.0
700,569 + 0.5
700,572 - -0.3