Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2646

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2645: 11013 - Hypothetical Protein, at 665744 to 666738 11013 mRNA_2646: 11014 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52058, at 667019 to 668057 11014 mRNA_2647: 11015 - Hypothetical Protein, at 668497 to 669102 11015

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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666,100 - 11013 mRNA_2645 0.36 1.2
666,102 + 11013 mRNA_2645 0.36 0.4
666,207 + 11013 mRNA_2645 0.47 -0.2
666,375 + 11013 mRNA_2645 0.63 -1.4
666,517 + 11013 mRNA_2645 0.78 0.7
666,639 + -1.6
666,662 + -1.3
666,917 + 1.9
667,380 + 11014 mRNA_2646 0.35 -0.3
667,604 + 11014 mRNA_2646 0.56 -0.6
667,673 - 11014 mRNA_2646 0.63 -1.5
667,963 + -0.6
668,352 + 0.9
668,538 + 0.6
668,945 - 11015 mRNA_2647 0.74 3.0