Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2641

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2640: 11008 - Hypothetical Protein, at 656963 to 657920 11008 mRNA_2641: 11009 - Hypothetical Protein, at 658203 to 659346 11009 mRNA_2642: 11010 - K17428 MRPL47, NCM1 large subunit ribosomal protein L47, at 659870 to 660906 11010

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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657,462 - 11008 mRNA_2640 0.52 -0.7
657,487 + 11008 mRNA_2640 0.55 1.3
657,500 - 11008 mRNA_2640 0.56 0.9
657,534 - 11008 mRNA_2640 0.60 0.1
657,537 - 11008 mRNA_2640 0.60 -0.2
657,537 - 11008 mRNA_2640 0.60 0.7
657,559 - 11008 mRNA_2640 0.62 -1.1
657,563 + 11008 mRNA_2640 0.63 0.8
657,569 - 11008 mRNA_2640 0.63 2.0
657,570 + 11008 mRNA_2640 0.63 0.3
657,609 - 11008 mRNA_2640 0.67 -0.3
657,615 + 11008 mRNA_2640 0.68 0.3
657,619 + 11008 mRNA_2640 0.68 -0.2
657,619 + 11008 mRNA_2640 0.68 -1.7
657,620 - 11008 mRNA_2640 0.69 -0.1
657,636 - 11008 mRNA_2640 0.70 0.1
657,638 + 11008 mRNA_2640 0.70 -1.0
657,645 + 11008 mRNA_2640 0.71 0.2
657,682 - 11008 mRNA_2640 0.75 0.1
657,691 - 11008 mRNA_2640 0.76 1.9
657,778 - 11008 mRNA_2640 0.85 0.3
657,787 + 11008 mRNA_2640 0.86 -0.8
657,811 + 11008 mRNA_2640 0.89 0.4
657,812 - 11008 mRNA_2640 0.89 -0.1
657,820 - 11008 mRNA_2640 0.89 -0.2
657,832 + -0.2
657,832 + 0.5
657,857 - 0.7
657,882 - 0.1
657,883 - -0.4
657,886 - 1.3
657,898 + -1.3
657,910 - 0.3
657,914 - -1.3
657,920 - -0.3
657,920 + -0.3
657,934 - -0.1
657,939 - -1.7
657,942 + 0.7
657,953 - 0.4
657,954 + -1.0
657,975 + 1.8
657,975 - -0.4
657,995 + 1.0
657,997 - -0.3
657,997 - 0.7
657,998 - 0.1
658,000 + 0.2
658,003 - -0.3
658,008 - -0.8
658,009 - -0.2
658,018 - 1.0
658,019 - -0.1
658,020 - 2.6
658,022 - 1.8
658,043 + -0.0
658,056 - 0.9
658,130 - 1.3
658,156 - 0.8
658,161 - 1.4
658,166 + 0.3
658,192 + -0.4
658,206 - -0.5
658,287 - -1.0
658,298 - -0.1
658,309 + 1.0
658,377 - 11009 mRNA_2641 0.15 0.5
658,433 + 11009 mRNA_2641 0.20 -0.8
658,633 + 11009 mRNA_2641 0.38 -0.6
658,645 + 11009 mRNA_2641 0.39 -2.1
658,769 - 11009 mRNA_2641 0.49 -0.9
658,943 + 11009 mRNA_2641 0.65 0.4
659,096 + 11009 mRNA_2641 0.78 -1.7
659,765 - -0.2
659,938 + -0.1
659,960 - 0.1