Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2631

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2630: 10998 - KOG1581 UDP-galactose transporter related protein, at 629452 to 632288 10998 mRNA_2631: 10999 - K14803 PTC2_3 protein phosphatase PTC2/3, at 632765 to 634825 10999

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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631,782 + 10998 mRNA_2630 0.82 -0.3
631,877 + 10998 mRNA_2630 0.85 1.1
631,898 - 10998 mRNA_2630 0.86 0.7
631,935 - 10998 mRNA_2630 0.88 0.5
632,336 - -1.1
632,340 + -0.6
632,349 - -1.4
632,383 + -0.0
632,474 - 0.2
632,477 - -0.8
632,732 - -0.2
632,735 - -0.3
632,736 + -1.5
633,064 + 10999 mRNA_2631 0.15 1.9
633,084 + 10999 mRNA_2631 0.15 -0.9
633,543 - 10999 mRNA_2631 0.38 -0.0
633,649 + 10999 mRNA_2631 0.43 0.2
633,660 - 10999 mRNA_2631 0.43 -1.3
633,699 - 10999 mRNA_2631 0.45 1.0
634,194 + 10999 mRNA_2631 0.69 -0.1
634,229 - 10999 mRNA_2631 0.71 0.5
634,229 - 10999 mRNA_2631 0.71 -0.3
634,251 + 10999 mRNA_2631 0.72 -0.7
634,487 - 10999 mRNA_2631 0.84 0.8
634,532 - 10999 mRNA_2631 0.86 -0.9
634,549 + 10999 mRNA_2631 0.87 0.1
634,563 + 10999 mRNA_2631 0.87 -0.3
634,688 - -0.9
634,689 + -0.7
634,697 + -0.5
634,826 + 1.2
634,830 - -0.6
634,835 + 0.2
634,993 - 0.5
634,994 - 1.6
634,995 - -0.6
634,996 + -1.2
635,003 + 0.5
635,013 + 1.4
635,018 + 1.3
635,024 + 0.4
635,024 + -0.8
635,033 - 0.4
635,034 - 0.1
635,288 + 0.1
635,445 + 1.5
635,468 - 0.6
635,733 - 1.7
635,736 - -0.3