Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2630

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2629: 10997 - Hypothetical Protein, at 628565 to 629191 10997 mRNA_2630: 10998 - KOG1581 UDP-galactose transporter related protein, at 629452 to 632288 10998 mRNA_2631: 10999 - K14803 PTC2_3 protein phosphatase PTC2/3, at 632765 to 634825 10999

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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628,477 - -0.8
628,531 - 0.4
628,717 - 10997 mRNA_2629 0.24 -0.1
628,805 - 10997 mRNA_2629 0.38 2.2
628,947 + 10997 mRNA_2629 0.61 -0.0
628,970 - 10997 mRNA_2629 0.65 0.9
628,971 - 10997 mRNA_2629 0.65 0.1
629,017 - 10997 mRNA_2629 0.72 -0.8
629,095 - 10997 mRNA_2629 0.85 -0.1
629,107 - 10997 mRNA_2629 0.86 -1.3
629,121 - 10997 mRNA_2629 0.89 -1.3
629,130 + -0.0
629,155 - -1.8
629,181 - -1.8
629,183 + -1.1
629,193 - -0.8
629,223 - 2.5
629,234 + -2.5
629,238 + -2.3
629,238 + 0.5
629,241 + -1.0
629,242 + 0.1
629,254 - -0.9
629,254 + -0.1
629,255 - -0.3
629,260 - 1.8
629,261 + 0.3
629,261 + 1.0
629,267 - 1.6
629,276 + 0.7
629,282 - 0.1
629,285 - 0.2
629,287 - 0.7
629,295 + -3.4
629,313 - -0.6
629,314 + -1.7
629,393 + -1.2
629,426 - -1.3
629,555 - -0.2
629,755 + 10998 mRNA_2630 0.11 -0.2
629,760 + 10998 mRNA_2630 0.11 0.9
629,774 + 10998 mRNA_2630 0.11 -2.6
629,876 - 10998 mRNA_2630 0.15 -0.1
629,890 + 10998 mRNA_2630 0.15 -2.6
629,916 - 10998 mRNA_2630 0.16 -0.4
629,920 - 10998 mRNA_2630 0.16 -0.3
630,150 - 10998 mRNA_2630 0.25 -0.4
630,154 - 10998 mRNA_2630 0.25 -1.0
630,443 - 10998 mRNA_2630 0.35 -2.2
630,607 + 10998 mRNA_2630 0.41 0.7
630,868 - 10998 mRNA_2630 0.50 -0.2
631,065 - 10998 mRNA_2630 0.57 0.2
631,183 - 10998 mRNA_2630 0.61 -1.3
631,200 - 10998 mRNA_2630 0.62 0.8
631,301 + 10998 mRNA_2630 0.65 -0.8
631,502 + 10998 mRNA_2630 0.72 0.4
631,598 + 10998 mRNA_2630 0.76 -0.6
631,694 - 10998 mRNA_2630 0.79 -1.1
631,707 + 10998 mRNA_2630 0.79 1.2
631,782 + 10998 mRNA_2630 0.82 -0.3
631,877 + 10998 mRNA_2630 0.85 1.1
631,898 - 10998 mRNA_2630 0.86 0.7
631,935 - 10998 mRNA_2630 0.88 0.5
632,336 - -1.1
632,340 + -0.6
632,349 - -1.4
632,383 + -0.0
632,474 - 0.2
632,477 - -0.8
632,732 - -0.2
632,735 - -0.3
632,736 + -1.5
633,064 + 10999 mRNA_2631 0.15 1.9
633,084 + 10999 mRNA_2631 0.15 -0.9