Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2629

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2628: 10996 - K09468 MSN2_4 zinc finger protein MSN2/4, at 625936 to 628159 10996 mRNA_2629: 10997 - Hypothetical Protein, at 628565 to 629191 10997 mRNA_2630: 10998 - KOG1581 UDP-galactose transporter related protein, at 629452 to 632288 10998

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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627,582 + 10996 mRNA_2628 0.74 0.6
627,845 - 10996 mRNA_2628 0.86 -0.5
628,056 - 0.1
628,154 + -1.8
628,203 - -1.4
628,220 - -1.3
628,281 - 0.6
628,477 - -0.8
628,531 - 0.4
628,717 - 10997 mRNA_2629 0.24 -0.1
628,805 - 10997 mRNA_2629 0.38 2.2
628,947 + 10997 mRNA_2629 0.61 -0.0
628,970 - 10997 mRNA_2629 0.65 0.9
628,971 - 10997 mRNA_2629 0.65 0.1
629,017 - 10997 mRNA_2629 0.72 -0.8
629,095 - 10997 mRNA_2629 0.85 -0.1
629,107 - 10997 mRNA_2629 0.86 -1.3
629,121 - 10997 mRNA_2629 0.89 -1.3
629,130 + -0.0
629,155 - -1.8
629,181 - -1.8
629,183 + -1.1
629,193 - -0.8
629,223 - 2.5
629,234 + -2.5
629,238 + -2.3
629,238 + 0.5
629,241 + -1.0
629,242 + 0.1
629,254 - -0.9
629,254 + -0.1
629,255 - -0.3
629,260 - 1.8
629,261 + 0.3
629,261 + 1.0
629,267 - 1.6
629,276 + 0.7
629,282 - 0.1
629,285 - 0.2
629,287 - 0.7
629,295 + -3.4
629,313 - -0.6
629,314 + -1.7
629,393 + -1.2
629,426 - -1.3
629,555 - -0.2
629,755 + 10998 mRNA_2630 0.11 -0.2
629,760 + 10998 mRNA_2630 0.11 0.9
629,774 + 10998 mRNA_2630 0.11 -2.6
629,876 - 10998 mRNA_2630 0.15 -0.1
629,890 + 10998 mRNA_2630 0.15 -2.6
629,916 - 10998 mRNA_2630 0.16 -0.4
629,920 - 10998 mRNA_2630 0.16 -0.3
630,150 - 10998 mRNA_2630 0.25 -0.4
630,154 - 10998 mRNA_2630 0.25 -1.0