Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2627

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621778 to 623321 10994 mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624250 to 625308 10995 mRNA_2628: 10996 - K09468 MSN2_4 zinc finger protein MSN2/4, at 625936 to 628159 10996

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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623,305 - -0.3
623,452 - -1.1
623,457 - 0.6
623,460 + -1.7
623,461 + 1.4
623,586 + -0.2
623,608 + 0.9
623,620 - 0.6
623,622 - -0.0
623,627 - -0.0
623,631 - 0.4
623,752 + -0.9
623,761 + -3.4
623,764 - -1.6
623,771 - 0.6
623,906 + 0.3
623,908 + -0.1
623,913 + 1.5
623,919 + 0.2
624,074 + -0.1
624,167 + 0.7
624,467 + 10995 mRNA_2627 0.20 -0.0
624,787 + 10995 mRNA_2627 0.51 -0.5
624,787 + 10995 mRNA_2627 0.51 -0.5
624,797 + 10995 mRNA_2627 0.52 3.2
624,948 - 10995 mRNA_2627 0.66 -0.4
625,525 + -0.2
625,526 + 0.4
625,531 + -0.6
625,652 - 0.7
625,658 - -0.8
625,663 + -2.9
625,675 + 1.8
625,692 + -1.0
625,816 - -0.1
625,821 + 1.3
625,831 + -1.9
625,942 - -0.5
626,101 + 0.4