Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2587

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2587: 10955 - K04368 MAP2K1, MEK1 mitogen-activated protein kinase kinase 1, at 543076 to 544917 10955 mRNA_2588: 10956 - K03246 EIF3I translation initiation factor 3 subunit I, at 545209 to 547043 10956

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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542,176 - 0.2
542,249 - -0.6
542,571 + -0.0
542,630 + 0.7
542,747 - -0.4
542,750 - 0.6
542,757 - -0.5
542,796 + 0.8
542,817 + 0.0
542,836 + 0.6
543,018 - -0.1
543,877 + 10955 mRNA_2587 0.43 1.2
544,185 - 10955 mRNA_2587 0.60 0.1
544,463 - 10955 mRNA_2587 0.75 0.8
544,767 + 0.9
544,771 - -1.3
545,191 + -0.8