Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2558

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2557: 10925 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 437565 to 439347 10925 mRNA_2558: 10926 - KOG3183 Predicted Zn-finger protein, at 439511 to 440693 10926 mRNA_2559: 10927 - HMMPfam-Translin family-PF01997,SUPERFAMILY--SSF74784, at 441201 to 442474 10927

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
438,575 - 10925 mRNA_2557 0.57 0.8
438,662 - 10925 mRNA_2557 0.62 0.7
438,832 - 10925 mRNA_2557 0.71 -1.6
438,962 - 10925 mRNA_2557 0.78 -0.1
439,070 - 10925 mRNA_2557 0.84 -0.9
439,070 - 10925 mRNA_2557 0.84 1.0
439,273 - 0.2
439,301 - -0.4
439,994 + 10926 mRNA_2558 0.41 -0.1
440,130 - 10926 mRNA_2558 0.52 0.6
440,370 - 10926 mRNA_2558 0.73 -0.8
440,370 + 10926 mRNA_2558 0.73 -0.6
440,559 + 10926 mRNA_2558 0.89 -0.7
440,684 + -1.3
440,744 + -1.4
440,848 + -0.8
440,870 + -2.7
440,872 + -0.7
440,887 - -0.1
441,018 - 0.1
441,030 - -1.0
441,152 - 0.5
441,157 - 0.4
441,168 - 0.1
441,179 + 1.3
441,305 - 0.2
441,309 + -1.2
441,317 - 0.2
441,475 - 10927 mRNA_2559 0.22 -0.4
441,586 - 10927 mRNA_2559 0.30 -0.0
441,587 - 10927 mRNA_2559 0.30 0.3
441,602 + 10927 mRNA_2559 0.31 0.6