Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2541

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2540: 10908 - SUPERFAMILY--SSF52058, at 398635 to 399613 10908 mRNA_2541: 10909 - HMMPfam-Hemerythrin HHE cation binding domain-PF01814, at 400071 to 401322 10909 mRNA_2542: 10910 - Hypothetical Protein, at 401521 to 403165 10910

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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399,077 - 10908 mRNA_2540 0.45 0.2
399,265 - 10908 mRNA_2540 0.64 1.2
399,380 - 10908 mRNA_2540 0.76 0.2
399,434 + 10908 mRNA_2540 0.82 -0.4
399,680 - -1.0
399,681 + -0.5
399,704 + -0.0
399,808 - 1.0
399,918 + -0.4
399,975 - -0.9
400,205 + 10909 mRNA_2541 0.11 0.7
400,264 + 10909 mRNA_2541 0.15 -0.3
401,016 + 10909 mRNA_2541 0.75 -2.0
401,290 + -0.4
401,304 + 0.1
401,423 - 0.4
401,442 - -1.2
401,444 + -1.0
401,460 + -2.3
401,469 + 0.1
401,590 + 0.5
401,639 - -1.5
402,076 + 10910 mRNA_2542 0.34 0.4