Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2531

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2531: 10899 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 372269 to 375397 10899 mRNA_2532: 10900 - KOG2961 Predicted hydrolase (HAD superfamily), at 375571 to 377208 10900

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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371,550 + 0.4
371,642 + 0.6
371,663 - -0.9
371,667 + -0.2
371,813 + 1.8
371,927 - 2.0
371,932 - -2.3
371,943 - -0.3
371,943 - -0.4
371,948 - 0.9
371,956 - 0.8
372,111 + -1.2
372,135 - 1.0
372,512 - -1.9
372,997 - 10899 mRNA_2531 0.23 -1.1
373,027 + 10899 mRNA_2531 0.24 1.0
373,157 + 10899 mRNA_2531 0.28 -0.9
373,399 - 10899 mRNA_2531 0.36 -1.8
373,667 + 10899 mRNA_2531 0.45 -0.2
373,737 - 10899 mRNA_2531 0.47 -0.4
374,341 - 10899 mRNA_2531 0.66 0.0
374,774 + 10899 mRNA_2531 0.80 -1.8
375,306 + 0.7
375,339 + 1.1
375,345 - -0.4
375,473 - -0.0
375,501 + 1.1
375,506 + 0.8
375,561 - -0.7