Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2492

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2491: 10859 - K12837 U2AF2 splicing factor U2AF 65 kDa subunit, at 275089 to 277521 10859 mRNA_2492: 10860 - HMMPfam-Rsm1-like-PF08600, at 277761 to 278480 10860 mRNA_2493: 10861 - KOG3098 Uncharacterized conserved protein, at 279372 to 281338 10861

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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277,545 - 1.6
277,689 - -0.4
277,701 + -4.0
277,816 - 0.1
278,024 + 10860 mRNA_2492 0.37 -0.6
278,177 - 10860 mRNA_2492 0.58 -0.8
278,567 + -0.2
278,808 - 0.1
278,987 + -1.5
279,102 - 2.5
279,104 - 0.6
279,258 - 2.1
279,283 + 0.2
279,386 - 0.5
279,397 - 2.1
279,406 + 0.2
279,409 - -1.5