Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2486

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2485: 10853 - K07760 CDK cyclin-dependent kinase, at 261080 to 262482 10853 mRNA_2486: 10854 - KOG3134 Predicted membrane protein, at 262874 to 263661 10854 mRNA_2487: 10855 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 264187 to 266262 10855

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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262,677 + 1.9
262,724 + -0.5
262,759 + 0.6
262,811 - 1.1
262,959 - 10854 mRNA_2486 0.11 -2.5
262,960 + 10854 mRNA_2486 0.11 -1.7
262,967 - 10854 mRNA_2486 0.12 0.4
263,096 - 10854 mRNA_2486 0.28 1.8
263,407 - 10854 mRNA_2486 0.68 -0.2
263,438 - 10854 mRNA_2486 0.72 0.3
263,596 - -0.4
263,706 + 0.5
263,992 - -0.4
264,506 + 10855 mRNA_2487 0.15 -0.1
264,561 - 10855 mRNA_2487 0.18 0.4
264,651 - 10855 mRNA_2487 0.22 -0.1