Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2485

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2484: 10852 - K11498 CENPE centromeric protein E, at 257699 to 260992 10852 mRNA_2485: 10853 - K07760 CDK cyclin-dependent kinase, at 261080 to 262482 10853 mRNA_2486: 10854 - KOG3134 Predicted membrane protein, at 262874 to 263661 10854

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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260,231 + 10852 mRNA_2484 0.77 0.2
260,285 - 10852 mRNA_2484 0.79 0.1
260,327 + 10852 mRNA_2484 0.80 1.0
260,557 - 10852 mRNA_2484 0.87 0.4
260,571 - 10852 mRNA_2484 0.87 0.1
260,582 + 10852 mRNA_2484 0.88 -0.9
260,793 + 0.7
260,850 + 0.3
261,008 + 0.1
261,016 - -2.2
261,100 + -0.6
261,487 + 10853 mRNA_2485 0.29 -0.9
261,612 + 10853 mRNA_2485 0.38 -1.1
261,805 + 10853 mRNA_2485 0.52 -0.6
262,677 + 1.9
262,724 + -0.5
262,759 + 0.6
262,811 - 1.1
262,959 - 10854 mRNA_2486 0.11 -2.5
262,960 + 10854 mRNA_2486 0.11 -1.7
262,967 - 10854 mRNA_2486 0.12 0.4
263,096 - 10854 mRNA_2486 0.28 1.8
263,407 - 10854 mRNA_2486 0.68 -0.2
263,438 - 10854 mRNA_2486 0.72 0.3