Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2484

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2483: 10851 - K17541 SCYL2 SCY1-like protein 2, at 254371 to 257459 10851 mRNA_2484: 10852 - K11498 CENPE centromeric protein E, at 257699 to 260992 10852 mRNA_2485: 10853 - K07760 CDK cyclin-dependent kinase, at 261080 to 262482 10853

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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256,984 + 10851 mRNA_2483 0.85 1.5
257,231 - -2.8
257,233 + 0.7
257,525 + -0.3
257,831 - -0.1
257,935 + 1.9
257,937 - -0.9
258,018 + 1.5
258,710 - 10852 mRNA_2484 0.31 0.0
258,712 - 10852 mRNA_2484 0.31 1.0
258,994 - 10852 mRNA_2484 0.39 -0.0
259,026 - 10852 mRNA_2484 0.40 -0.4
259,032 + 10852 mRNA_2484 0.40 -0.1
259,167 - 10852 mRNA_2484 0.45 -1.1
259,175 + 10852 mRNA_2484 0.45 -1.6
259,610 - 10852 mRNA_2484 0.58 1.1
260,025 - 10852 mRNA_2484 0.71 -1.9
260,231 + 10852 mRNA_2484 0.77 0.2
260,285 - 10852 mRNA_2484 0.79 0.1
260,327 + 10852 mRNA_2484 0.80 1.0
260,557 - 10852 mRNA_2484 0.87 0.4
260,571 - 10852 mRNA_2484 0.87 0.1
260,582 + 10852 mRNA_2484 0.88 -0.9
260,793 + 0.7
260,850 + 0.3
261,008 + 0.1
261,016 - -2.2
261,100 + -0.6
261,487 + 10853 mRNA_2485 0.29 -0.9
261,612 + 10853 mRNA_2485 0.38 -1.1
261,805 + 10853 mRNA_2485 0.52 -0.6