Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2480

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2479: 10847 - Hypothetical Protein, at 246856 to 249133 10847 mRNA_2480: 10848 - KOG0907 Thioredoxin, at 249211 to 249707 10848 mRNA_2481: 10849 - Hypothetical Protein, at 250037 to 250801 10849

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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248,277 - 10847 mRNA_2479 0.62 0.6
248,303 + 10847 mRNA_2479 0.64 0.9
248,379 - 10847 mRNA_2479 0.67 0.3
248,746 + 10847 mRNA_2479 0.83 1.5
249,000 + 0.6
249,276 - 10848 mRNA_2480 0.13 -0.0
249,293 - 10848 mRNA_2480 0.16 -0.2
249,423 - 10848 mRNA_2480 0.43 -1.8
249,719 + -0.2
249,864 - 1.1
249,869 + -1.2
249,874 - -1.9
249,885 + 0.6
250,016 + 1.2
250,042 - 1.6
250,049 - 1.8
250,054 + -0.1
250,085 - -0.1
250,100 + 0.6
250,108 + -0.4
250,253 - 10849 mRNA_2481 0.28 -0.2
250,428 - 10849 mRNA_2481 0.51 -0.1
250,597 + 10849 mRNA_2481 0.73 1.8
250,649 + 10849 mRNA_2481 0.80 -0.2