Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2459

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2458: 10826 - K04799 FEN1, RAD2 flap endonuclease-1, at 183785 to 185672 10826 mRNA_2459: 10827 - KOG2747 Histone acetyltransferase (MYST family), at 186043 to 188568 10827 mRNA_2460: 10828 - SUPERFAMILY--SSF57997, at 188946 to 195534 10828

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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185,978 - -0.7
186,290 + 1.5
186,579 - 10827 mRNA_2459 0.21 0.7
188,411 - 1.1
188,726 + 0.9
188,739 - 0.2
188,751 + 0.4
188,779 + 0.8
188,926 + -1.2
189,378 + 0.3
189,540 + -0.9
189,543 - 0.6