Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2433

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2432: 10800 - K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20, at 111348 to 112998 10800 mRNA_2433: 10801 - K10866 RAD50 DNA repair protein RAD50, at 113156 to 118783 10801 mRNA_2434: 10802 - HMMPfam-ATP synthase subunit H-PF05493, at 119507 to 119841 10802

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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112,458 - 10800 mRNA_2432 0.67 -0.2
112,605 + 10800 mRNA_2432 0.76 -1.3
113,013 - -0.5
113,893 - 10801 mRNA_2433 0.13 1.4
114,507 + 10801 mRNA_2433 0.24 -2.9
115,541 + 10801 mRNA_2433 0.42 0.4
116,530 - 10801 mRNA_2433 0.60 -1.0
118,761 + -1.1
118,946 - -1.3
119,068 + -3.8
119,094 + -1.8
119,104 + 0.1
119,120 + 0.1
119,226 + 2.2
119,388 - -1.7