Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2416

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2415: 10783 - Hypothetical Protein, at 70099 to 71162 10783 mRNA_2416: 10784 - SUPERFAMILY--SSF51445, at 72061 to 74634 10784 mRNA_2417: 10785 - SUPERFAMILY--SSF52047, at 74792 to 76110 10785

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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71,069 + -2.6
71,100 - -0.6
71,184 + 1.2
71,203 - 1.4
71,210 - -0.9
71,351 - 0.4
71,364 - 0.8
71,371 - 1.7
71,405 + -0.0
71,515 - -1.7
71,528 + -2.0
71,538 + -0.8
71,541 + -1.0
71,542 + 0.5
71,663 - -0.9
71,667 + 0.8
71,806 - 0.8
71,812 - -0.2
71,827 - -1.6
71,840 - -0.3
71,840 - 0.1
71,841 + 0.3
71,860 - 0.7
72,027 + -2.0
72,108 + 1.1
72,143 - 0.5
72,158 - 0.7
72,181 + 0.8
72,226 + -0.8
72,333 + 10784 mRNA_2416 0.11 1.3
72,735 + 10784 mRNA_2416 0.26 0.1
72,858 + 10784 mRNA_2416 0.31 -0.1
72,868 + 10784 mRNA_2416 0.31 -0.0
73,189 + 10784 mRNA_2416 0.44 -1.1
73,464 - 10784 mRNA_2416 0.55 -1.9
73,724 + 10784 mRNA_2416 0.65 0.9
74,016 + 10784 mRNA_2416 0.76 -0.4
74,257 + 10784 mRNA_2416 0.85 0.9
74,478 + 1.1
74,481 + -0.8
74,542 - 2.8
74,605 + -1.4
74,777 - 0.0
75,237 + 10785 mRNA_2417 0.34 -0.9
75,400 + 10785 mRNA_2417 0.46 -1.7
75,428 + 10785 mRNA_2417 0.48 -0.9