Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2407

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2406: 10774 - KOG4111 Translocase of outer mitochondrial membrane complex, subunit TOM22, at 52047 to 52986 10774 mRNA_2407: 10775 - K10880 XRCC3 DNA-repair protein XRCC3, at 53086 to 55006 10775 mRNA_2408: 10776 - K07975 K07975 Rho family, other, at 55235 to 56824 10776

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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52,120 - 0.6
52,842 - 10774 mRNA_2406 0.85 -3.5
52,852 + 10774 mRNA_2406 0.86 -1.4
52,865 + 10774 mRNA_2406 0.87 -0.1
52,870 - 10774 mRNA_2406 0.88 1.0
53,113 + -0.3
53,857 + 10775 mRNA_2407 0.40 1.1
54,129 - 10775 mRNA_2407 0.54 -0.9
54,324 - 10775 mRNA_2407 0.64 -1.4
55,274 - 0.5
55,304 + -0.0
55,597 - 10776 mRNA_2408 0.23 -1.0
55,740 + 10776 mRNA_2408 0.32 0.0