Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2398

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2397: 10765 - Hypothetical Protein, at 21326 to 23910 10765 mRNA_2398: 10766 - SUPERFAMILY--SSF52047, at 24008 to 25280 10766 mRNA_2399: 10767 - Hypothetical Protein, at 25510 to 29581 10767

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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23,076 - 10765 mRNA_2397 0.68 1.2
23,087 - 10765 mRNA_2397 0.68 -1.2
23,205 - 10765 mRNA_2397 0.73 -1.4
23,224 - 10765 mRNA_2397 0.73 0.1
23,495 - 10765 mRNA_2397 0.84 -0.2
23,667 - -1.4
23,682 + -0.9
23,780 - 1.0
23,789 + 0.3
23,790 + 0.7
23,814 + 2.5
23,941 - 1.6
23,953 + 1.5
23,955 + 0.3
24,014 + 0.5
24,021 + -0.4
24,121 + 0.7
24,133 - 1.9
24,145 + 10766 mRNA_2398 0.11 -0.0
24,169 - 10766 mRNA_2398 0.13 -0.7
24,440 - 10766 mRNA_2398 0.34 2.7
24,579 - 10766 mRNA_2398 0.45 0.5
24,581 - 10766 mRNA_2398 0.45 1.5
24,720 - 10766 mRNA_2398 0.56 2.5
24,750 + 10766 mRNA_2398 0.58 1.8
24,773 + 10766 mRNA_2398 0.60 3.1
24,856 - 10766 mRNA_2398 0.67 0.2
24,895 + 10766 mRNA_2398 0.70 0.2
24,895 + 10766 mRNA_2398 0.70 0.3
25,005 - 10766 mRNA_2398 0.78 -0.3
25,028 + 10766 mRNA_2398 0.80 -0.8
25,164 + -0.6
25,306 + 0.7
25,422 + 0.1
25,454 - -0.4
25,493 - 0.5
25,693 + 1.8
25,696 - 0.0
25,750 - -1.6
25,857 + 1.9
26,023 + 10767 mRNA_2399 0.13 0.0