Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2379

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2378: 10746 - Hypothetical Protein, at 753983 to 754459 10746 mRNA_2379: 10747 - HMMPfam-DASH complex subunit Duo1-PF08651, at 754598 to 756012 10747 mRNA_2380: 10748 - K07889 RAB5C Ras-related protein Rab-5C, at 756377 to 757308 10748

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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753,637 - -0.1
754,184 + 10746 mRNA_2378 0.42 -0.9
754,363 - 10746 mRNA_2378 0.80 0.7
754,365 - 10746 mRNA_2378 0.80 1.3
754,536 - -0.1
754,564 - -1.4
754,571 + 0.1
754,816 + 10747 mRNA_2379 0.15 -0.4
755,360 + 10747 mRNA_2379 0.54 -0.9
755,375 + 10747 mRNA_2379 0.55 -2.0
755,397 + 10747 mRNA_2379 0.56 0.0
755,822 + 10747 mRNA_2379 0.87 -2.4
755,838 + 10747 mRNA_2379 0.88 0.9
756,108 - 1.1
756,300 + 0.3
756,396 - 1.0
756,398 + -0.1
756,723 - 10748 mRNA_2380 0.37 -1.5