Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2375

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2374: 10742 - K12897 TRA2 transformer-2 protein, at 746572 to 748318 10742 mRNA_2375: 10743 - Hypothetical Protein, at 748560 to 749428 10743 mRNA_2376: 10744 - Hypothetical Protein, at 749688 to 751493 10744

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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748,354 - -0.4
748,361 - 1.3
748,368 - 1.4
748,534 + -0.4
748,800 - 10743 mRNA_2375 0.28 -1.0
748,810 - 10743 mRNA_2375 0.29 -0.1
748,816 - 10743 mRNA_2375 0.29 -2.3
748,967 - 10743 mRNA_2375 0.47 0.4
748,981 + 10743 mRNA_2375 0.48 1.1
749,409 + -0.1
749,538 - -0.1
749,705 + 0.2
750,001 - 10744 mRNA_2376 0.17 -0.1
750,109 + 10744 mRNA_2376 0.23 0.3
750,166 + 10744 mRNA_2376 0.26 1.8
750,272 + 10744 mRNA_2376 0.32 -0.4