Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2343

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2342: 10710 - Hypothetical Protein, at 667459 to 669644 10710 mRNA_2343: 10711 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 669815 to 670967 10711 mRNA_2344: 10712 - Hypothetical Protein, at 671205 to 671888 10712

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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669,314 - 10710 mRNA_2342 0.85 -0.5
669,337 - 10710 mRNA_2342 0.86 1.2
669,450 - -0.3
669,693 + 0.1
670,027 - 10711 mRNA_2343 0.18 1.1
670,315 + 10711 mRNA_2343 0.43 0.3
670,592 + 10711 mRNA_2343 0.67 -0.2
670,904 + 0.0
671,166 + 0.3
671,171 + 0.6
671,242 - 0.2
671,344 - 10712 mRNA_2344 0.20 -1.0
671,589 + 10712 mRNA_2344 0.56 -0.8
671,636 - 10712 mRNA_2344 0.63 1.0
671,648 + 10712 mRNA_2344 0.65 1.2
671,669 - 10712 mRNA_2344 0.68 -0.9
671,686 - 10712 mRNA_2344 0.70 -0.6
671,697 - 10712 mRNA_2344 0.72 -3.0
671,711 + 10712 mRNA_2344 0.74 -0.2
671,799 - 10712 mRNA_2344 0.87 -0.0
671,818 - 10712 mRNA_2344 0.90 -0.5
671,820 + -0.2
671,827 + 0.6
671,829 + -0.2
671,854 - 1.3
671,878 - 0.2
671,928 - 0.4
671,941 + 0.6
671,952 - -0.6