Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2327

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2326: 10694 - K03439 trmB, METTL1 tRNA (guanine-N7-)-methyltransferase, at 614539 to 615888 10694 mRNA_2327: 10695 - Hypothetical Protein, at 616454 to 617684 10695 mRNA_2328: 10696 - KOG0192 Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs, at 617793 to 619842 10696

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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615,935 - 0.2
615,962 - -1.1
616,081 - -0.8
616,124 + 0.5
616,219 - 0.1
616,231 + 1.0
616,431 - 0.4
616,515 + 0.1
616,699 + 10695 mRNA_2327 0.20 -0.2
616,936 - 10695 mRNA_2327 0.39 -2.7
617,384 - 10695 mRNA_2327 0.76 -0.3
617,541 + 10695 mRNA_2327 0.88 2.9
617,660 - 0.4
617,664 + -0.6
617,816 + 0.3
617,983 + -0.2
617,986 + 0.8
618,115 + 10696 mRNA_2328 0.16 -1.0
618,138 - 10696 mRNA_2328 0.17 -0.6
618,265 - 10696 mRNA_2328 0.23 1.0
618,301 + 10696 mRNA_2328 0.25 0.0
618,401 - 10696 mRNA_2328 0.30 -0.5
618,431 + 10696 mRNA_2328 0.31 0.2
618,449 - 10696 mRNA_2328 0.32 -1.6
618,457 + 10696 mRNA_2328 0.32 -0.5
618,508 + 10696 mRNA_2328 0.35 0.3
618,665 - 10696 mRNA_2328 0.43 0.7