Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2268

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2267: 10635 - K15110 SLC25A21, ODC solute carrier family 25 (mitochondrial 2-oxodicarboxylate transporter), member 21, at 488523 to 490039 10635 mRNA_2268: 10636 - K11215 STE12 transcription factor STE12, at 490121 to 491043 10636 mRNA_2269: 10637 - Hypothetical Protein, at 491612 to 491803 10637

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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489,495 - 10635 mRNA_2267 0.64 -1.7
489,666 + 10635 mRNA_2267 0.75 -0.7
489,879 - 10635 mRNA_2267 0.89 1.0
490,072 + 1.6
490,197 + -0.5
490,208 - -0.1
490,361 - 10636 mRNA_2268 0.26 1.8
490,362 + 10636 mRNA_2268 0.26 -1.0
490,517 - 10636 mRNA_2268 0.43 -0.7
490,649 - 10636 mRNA_2268 0.57 -0.3
490,658 + 10636 mRNA_2268 0.58 0.2
490,790 - 10636 mRNA_2268 0.72 -2.1
490,798 - 10636 mRNA_2268 0.73 0.4
490,850 - 10636 mRNA_2268 0.79 -0.9
490,932 + 10636 mRNA_2268 0.88 1.1
490,944 - 10636 mRNA_2268 0.89 0.5
490,952 - -1.3
490,965 + 0.8
491,104 - -0.3
491,104 - -2.0
491,105 + 1.5
491,109 + -0.5
491,117 - -1.0
491,118 + -0.3
491,120 + -0.0
491,124 - 0.3
491,124 - 1.0
491,135 + 1.1
491,137 - 1.2
491,138 - -0.9
491,139 + -1.1
491,139 + 2.0
491,139 - -1.4
491,140 - 0.3
491,141 - 0.0
491,143 + -0.6
491,144 - -0.3
491,144 - -0.5
491,146 + 1.5
491,155 + -0.9
491,158 - -0.4
491,158 + 1.0
491,162 + -0.5
491,201 + 0.3
491,203 + -1.8
491,208 + -2.4
491,209 + -0.5
491,218 - 0.4
491,218 + 1.0
491,219 + 0.0
491,220 - 0.7
491,220 + 0.3
491,222 - -0.4
491,228 + 0.2
491,321 - -0.3
491,350 - 1.4
491,377 + 0.9
491,399 + 1.2
491,534 - 0.5
491,535 + 1.7
491,552 + -0.5