Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2189

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2189: 10557 - K11236 CDC24 cell division control protein 24, at 296049 to 299793 10557

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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295,214 + 1.8
295,232 - -0.9
295,238 - 0.2
295,252 + -0.6
295,261 + -0.2
295,270 + -2.9
295,298 + 0.4
295,334 + -0.1
295,337 + 0.3
295,345 + 0.0
295,349 + 1.1
295,355 + 0.3
295,356 - -1.9
295,358 - 1.1
295,374 - -2.2
295,393 - 0.9
295,394 - 0.8
295,398 + 1.6
295,402 + -2.2
295,430 + 1.0
295,515 - 0.6
295,540 + 0.2
295,553 - 0.5
295,625 - -0.3
295,638 + 0.1
295,645 - 1.3
295,652 + -1.8
295,653 + 0.6
295,656 + 0.7
295,661 + 1.3
295,662 + -0.0
295,663 + 1.8
295,683 + 1.4
295,687 + -0.5
295,802 - 0.8
295,803 + -1.7
295,808 + 0.1
295,817 - -1.7
295,825 + 0.2
295,828 + -0.2
295,950 - -1.2
295,973 + -0.5
296,112 - 1.4
296,114 + 0.1
296,148 + 0.8
296,265 + -0.1
296,425 - 10557 mRNA_2189 0.10 -1.2
296,428 + 10557 mRNA_2189 0.10 -1.1
298,822 - 10557 mRNA_2189 0.74 0.8
298,998 - 10557 mRNA_2189 0.79 2.2
299,298 - 10557 mRNA_2189 0.87 2.5
299,746 - -0.3
299,798 + 1.6
299,888 - -1.8
300,093 - -2.5
300,217 - 0.4
300,243 + -0.2
300,332 + 1.1
300,339 - 0.1
300,352 + -1.9
300,356 + -0.6
300,359 - 0.7
300,397 + 0.7
300,503 - 0.3
300,506 - 0.3
300,543 - 0.1
300,619 - 0.4
300,674 + -0.2
300,680 + -0.6
300,688 + -0.9
300,690 + -1.0