Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2182

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2182: 10550 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 282735 to 284065 10550 mRNA_2183: 10551 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 284423 to 286019 10551

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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281,748 + 0.1
281,795 - 0.9
281,801 - -0.9
281,924 - 0.8
282,256 + 2.3
282,373 - -2.1
282,379 + -0.1
282,389 - -0.4
282,515 - 1.4
282,651 - 0.3
282,663 + 0.9
282,666 - -0.3
282,677 + 1.4
282,686 + -0.4
282,810 + -1.0
282,927 + 10550 mRNA_2182 0.14 1.0
282,950 + 10550 mRNA_2182 0.16 -0.8
283,092 - 10550 mRNA_2182 0.27 0.5
284,083 + -0.3
284,121 - -0.1
284,124 + -0.9
284,251 + 0.7
284,973 - 10551 mRNA_2183 0.34 1.4
284,978 - 10551 mRNA_2183 0.35 0.2