Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2145

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2144: 10512 - Hypothetical Protein, at 182114 to 183256 10512 mRNA_2145: 10513 - HMMPfam-Protein of unknown function DUF89-PF01937,SUPERFAMILY--SSF111321, at 183733 to 185513 10513 mRNA_2146: 10514 - K15100 SLC25A1, CTP solute carrier family 25 (mitochondrial citrate transporter), member 1, at 185762 to 187254 10514

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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182,847 + 10512 mRNA_2144 0.64 0.1
182,850 - 10512 mRNA_2144 0.64 -0.1
182,851 - 10512 mRNA_2144 0.64 -0.1
183,008 + 10512 mRNA_2144 0.78 -0.3
183,220 - 2.1
183,220 + 1.2
183,308 + -0.9
183,311 - -1.6
183,312 + -0.0
183,315 - 0.1
183,407 - 0.8
183,500 - -3.2
183,565 - -0.9
183,582 - -0.3
183,701 - -1.1
183,741 - -1.1
183,743 + -0.1
183,757 - 0.0
183,806 + -0.3
183,809 - 1.3
183,815 + -0.1
183,904 - -1.8
183,970 + 10513 mRNA_2145 0.13 -0.6
183,972 - 10513 mRNA_2145 0.13 -1.2
184,009 + 10513 mRNA_2145 0.15 1.7
184,015 - 10513 mRNA_2145 0.16 -1.4
184,027 + 10513 mRNA_2145 0.17 1.0
184,074 - 10513 mRNA_2145 0.19 -0.4
184,140 + 10513 mRNA_2145 0.23 -0.4
184,146 + 10513 mRNA_2145 0.23 0.6
184,192 + 10513 mRNA_2145 0.26 0.0
184,254 + 10513 mRNA_2145 0.29 -2.2
184,272 - 10513 mRNA_2145 0.30 -0.1
184,276 - 10513 mRNA_2145 0.30 0.5
184,671 + 10513 mRNA_2145 0.53 1.2
184,676 - 10513 mRNA_2145 0.53 0.0
184,755 + 10513 mRNA_2145 0.57 0.6
184,776 + 10513 mRNA_2145 0.59 0.4
184,855 + 10513 mRNA_2145 0.63 1.3
184,868 + 10513 mRNA_2145 0.64 -0.3
184,875 + 10513 mRNA_2145 0.64 -1.5
184,955 + 10513 mRNA_2145 0.69 0.0
184,989 + 10513 mRNA_2145 0.71 -0.3
185,050 - 10513 mRNA_2145 0.74 -0.8
185,151 + 10513 mRNA_2145 0.80 0.4
185,162 - 10513 mRNA_2145 0.80 2.9
185,163 + 10513 mRNA_2145 0.80 1.0
185,185 - 10513 mRNA_2145 0.82 -1.5
185,195 + 10513 mRNA_2145 0.82 1.3
185,249 - 10513 mRNA_2145 0.85 0.3
185,253 + 10513 mRNA_2145 0.85 1.9
185,316 + 10513 mRNA_2145 0.89 -0.2
185,439 + -2.9
185,507 - -0.7
185,656 + -0.2
185,681 - 0.5
185,718 - -0.9
185,720 + 0.1
185,759 - 0.2
185,759 - 0.1
185,835 + 0.8
185,871 + 0.0
185,921 - 10514 mRNA_2146 0.11 -1.9
185,972 + 10514 mRNA_2146 0.14 -1.8
185,982 - 10514 mRNA_2146 0.15 1.1
186,136 + 10514 mRNA_2146 0.25 -0.2
186,415 - 10514 mRNA_2146 0.44 -1.8
186,469 - 10514 mRNA_2146 0.47 -0.6