Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2123

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2122: 10490 - K00103 GULO L-gulonolactone oxidase, at 124559 to 126866 10490 mRNA_2123: 10491 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 127215 to 128574 10491 mRNA_2124: 10492 - Hypothetical Protein, at 128635 to 129596 10492

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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126,270 - 10490 mRNA_2122 0.74 -0.1
126,440 + 10490 mRNA_2122 0.81 0.4
126,861 + 0.9
126,861 - -1.0
127,144 - 0.8
127,149 + 1.3
127,273 - 1.7
127,582 - 10491 mRNA_2123 0.27 -0.9
127,696 - 10491 mRNA_2123 0.35 0.0
127,782 + 10491 mRNA_2123 0.42 2.2
127,865 - 10491 mRNA_2123 0.48 -0.3
128,002 + 10491 mRNA_2123 0.58 0.6
128,456 + 0.6
128,484 + 2.4
128,789 - 10492 mRNA_2124 0.16 0.0
128,874 - 10492 mRNA_2124 0.25 -0.1
128,874 - 10492 mRNA_2124 0.25 -0.9
129,047 + 10492 mRNA_2124 0.43 2.1
129,074 - 10492 mRNA_2124 0.46 -0.6
129,203 + 10492 mRNA_2124 0.59 0.5
129,230 + 10492 mRNA_2124 0.62 -0.6