Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2068

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2067: 10435 - BLAST cell morphogenesis protein [Grosmannia clavigera ..., at 868963 to 869751 10435 mRNA_2068: 10436 - Hypothetical Protein, at 869923 to 870194 10436

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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868,932 - 0.1
868,957 - 2.7
868,974 + 1.2
868,980 - 0.9
868,983 - 1.0
869,027 - 0.2
869,097 + 10435 mRNA_2067 0.17 -1.7
869,174 + 10435 mRNA_2067 0.27 -0.1
869,210 - 10435 mRNA_2067 0.31 0.4
869,232 + 10435 mRNA_2067 0.34 2.0
869,239 - 10435 mRNA_2067 0.35 0.6
869,248 - 10435 mRNA_2067 0.36 1.1
869,360 - 10435 mRNA_2067 0.50 -0.4
869,379 - 10435 mRNA_2067 0.53 -0.6
869,379 - 10435 mRNA_2067 0.53 -0.9
869,385 + 10435 mRNA_2067 0.53 1.2
869,405 - 10435 mRNA_2067 0.56 -1.4
869,405 - 10435 mRNA_2067 0.56 0.2
869,406 + 10435 mRNA_2067 0.56 0.3
869,493 - 10435 mRNA_2067 0.67 1.6
869,524 - 10435 mRNA_2067 0.71 -1.1
869,540 - 10435 mRNA_2067 0.73 -2.2
869,591 - 10435 mRNA_2067 0.80 0.8
869,620 - 10435 mRNA_2067 0.83 -0.1
869,624 - 10435 mRNA_2067 0.84 0.1
869,629 - 10435 mRNA_2067 0.84 -2.6
869,641 - 10435 mRNA_2067 0.86 -1.8
869,651 - 10435 mRNA_2067 0.87 -0.5
869,689 - 0.0
869,714 + 1.2
869,721 - 0.9
869,758 - -1.0
869,758 + -0.9
869,771 - 0.3
869,775 - 0.5
869,795 - -0.5
869,864 - -1.7
869,866 - 0.5
869,877 - 0.2
869,881 - 0.1
869,903 - 0.4
869,904 - 1.0
869,908 - 0.6
869,923 - -2.0
869,942 - 0.5
869,943 - -0.3
869,948 - 1.2
869,964 + 10436 mRNA_2068 0.15 -0.2
869,966 - 10436 mRNA_2068 0.16 -0.7
869,990 + 10436 mRNA_2068 0.25 3.1
869,990 + 10436 mRNA_2068 0.25 -0.3
869,990 - 10436 mRNA_2068 0.25 0.0
870,004 - 10436 mRNA_2068 0.30 0.4
870,012 + 10436 mRNA_2068 0.33 0.4
870,033 - 10436 mRNA_2068 0.40 -0.4
870,035 - 10436 mRNA_2068 0.41 3.7
870,042 - 10436 mRNA_2068 0.44 -0.7
870,044 + 10436 mRNA_2068 0.44 0.1
870,054 + 10436 mRNA_2068 0.48 1.1
870,056 - 10436 mRNA_2068 0.49 -0.4
870,058 - 10436 mRNA_2068 0.50 0.9
870,061 - 10436 mRNA_2068 0.51 0.4
870,070 - 10436 mRNA_2068 0.54 0.7
870,086 - 10436 mRNA_2068 0.60 -0.6
870,086 - 10436 mRNA_2068 0.60 0.2
870,093 + 10436 mRNA_2068 0.62 0.2
870,107 - 10436 mRNA_2068 0.68 0.0
870,112 + 10436 mRNA_2068 0.69 -2.0
870,127 - 10436 mRNA_2068 0.75 1.7
870,145 - 10436 mRNA_2068 0.82 0.1
870,148 - 10436 mRNA_2068 0.83 0.4
870,158 - 10436 mRNA_2068 0.86 -1.2
870,171 + 0.2
870,172 - -0.7
870,172 - -2.2
870,172 - 1.4
870,172 - 0.2
870,173 + -0.6
870,173 + -2.2
870,176 - 1.9
870,180 - -0.3
870,192 - 0.5
870,205 - 0.5
870,210 - -0.6
870,210 - 1.7
870,210 - 0.4
870,210 - 0.6
870,210 - -0.0