Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2066

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2065: 10433 - Hypothetical Protein, at 866238 to 867408 10433 mRNA_2066: 10434 - SUPERFAMILY--SSF52047, at 867605 to 868583 10434 mRNA_2067: 10435 - BLAST cell morphogenesis protein [Grosmannia clavigera ..., at 868963 to 869751 10435

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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866,697 - 10433 mRNA_2065 0.39 0.7
866,716 - 10433 mRNA_2065 0.41 0.7
866,868 - 10433 mRNA_2065 0.54 -0.0
866,876 - 10433 mRNA_2065 0.54 0.4
867,206 - 10433 mRNA_2065 0.83 -2.4
867,288 - 10433 mRNA_2065 0.90 4.0
867,319 - -0.8
867,385 + 1.0
867,431 - 0.3
867,466 - 0.5
867,479 - 1.0
867,486 + -2.3
867,486 + -0.4
867,488 - 0.9
867,574 - -1.0
867,583 - -0.6
867,596 - -0.1
867,619 + -0.4
867,639 - -1.2
867,944 - 10434 mRNA_2066 0.35 -1.0
867,948 + 10434 mRNA_2066 0.35 -1.1
867,991 - 10434 mRNA_2066 0.39 0.7
868,059 - 10434 mRNA_2066 0.46 -1.1
868,066 + 10434 mRNA_2066 0.47 -2.2
868,214 + 10434 mRNA_2066 0.62 -2.7
868,253 - 10434 mRNA_2066 0.66 -0.2
868,298 - 10434 mRNA_2066 0.71 -0.5
868,342 - 10434 mRNA_2066 0.75 -0.9
868,390 - 10434 mRNA_2066 0.80 -1.0
868,493 - 0.6
868,501 + -0.3
868,534 + -2.2
868,534 + -1.3
868,555 - -0.3
868,625 - 0.3
868,626 - 1.1
868,645 - 0.2
868,712 - -0.5
868,813 - 1.0
868,875 - 0.1
868,932 - 0.1
868,957 - 2.7
868,974 + 1.2
868,980 - 0.9
868,983 - 1.0
869,027 - 0.2
869,097 + 10435 mRNA_2067 0.17 -1.7
869,174 + 10435 mRNA_2067 0.27 -0.1
869,210 - 10435 mRNA_2067 0.31 0.4
869,232 + 10435 mRNA_2067 0.34 2.0
869,239 - 10435 mRNA_2067 0.35 0.6
869,248 - 10435 mRNA_2067 0.36 1.1
869,360 - 10435 mRNA_2067 0.50 -0.4
869,379 - 10435 mRNA_2067 0.53 -0.6
869,379 - 10435 mRNA_2067 0.53 -0.9
869,385 + 10435 mRNA_2067 0.53 1.2
869,405 - 10435 mRNA_2067 0.56 -1.4
869,405 - 10435 mRNA_2067 0.56 0.2
869,406 + 10435 mRNA_2067 0.56 0.3
869,493 - 10435 mRNA_2067 0.67 1.6
869,524 - 10435 mRNA_2067 0.71 -1.1
869,540 - 10435 mRNA_2067 0.73 -2.2