Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2060

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2059: 10427 - K13509 AGPAT1_2 lysophosphatidate acyltransferase, at 853881 to 854956 10427 mRNA_2060: 10428 - K05824 LYS12 homoisocitrate dehydrogenase, at 855890 to 857453 10428 mRNA_2061: 10429 - HMMPfam-Protein of unknown function (DUF1640)-PF07798, at 857800 to 859276 10429

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
855,054 - 0.4
855,056 + 0.2
855,205 + 0.2
855,465 - -1.4
855,468 + 0.5
855,469 + -1.2
855,639 + 1.7
855,644 - 0.5
855,651 + 0.7
855,754 + -0.4
855,911 - 2.3
855,954 - -1.4
856,079 + 10428 mRNA_2060 0.12 -1.2
856,736 - 10428 mRNA_2060 0.54 -1.1
856,753 - 10428 mRNA_2060 0.55 -0.7
857,044 + 10428 mRNA_2060 0.74 -1.6
857,100 - 10428 mRNA_2060 0.77 0.6
857,125 - 10428 mRNA_2060 0.79 -1.0
857,222 + 10428 mRNA_2060 0.85 0.2
857,368 - -0.8
857,393 - -0.3
857,528 - 1.3
857,667 - 0.1
857,813 - -0.6
857,815 + -0.6
857,831 + -0.1
858,388 + 10429 mRNA_2061 0.40 -0.2