Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1992

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1991: 10359 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 687558 to 690393 10359 mRNA_1992: 10360 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 690779 to 693096 10360 mRNA_1993: 10361 - Hypothetical Protein, at 694051 to 694539 10361

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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690,693 + 0.6
690,715 + -0.0
691,023 - 10360 mRNA_1992 0.11 0.5
691,255 - 10360 mRNA_1992 0.21 -0.1
691,588 - 10360 mRNA_1992 0.35 -0.6
691,715 + 10360 mRNA_1992 0.40 -0.6
691,730 - 10360 mRNA_1992 0.41 -2.8
691,851 + 10360 mRNA_1992 0.46 -0.8
692,036 - 10360 mRNA_1992 0.54 -0.5
692,039 + 10360 mRNA_1992 0.54 0.2
692,190 + 10360 mRNA_1992 0.61 0.9
692,323 + 10360 mRNA_1992 0.67 3.2
692,457 + 10360 mRNA_1992 0.72 0.4
692,485 + 10360 mRNA_1992 0.74 0.9
693,067 + 0.2
693,068 - -1.1
693,089 - 1.3
693,095 + 1.1
693,194 - 0.4
693,202 - 0.8
693,210 + 2.3
693,211 + 0.7
693,223 + -3.0
693,223 - 0.2
693,239 + 0.7
693,244 - 0.3
693,248 + 1.2
693,272 + -0.6
693,279 + -0.2
693,315 - 0.5
693,340 - -1.0
693,364 - -0.3
693,374 + 0.1
693,388 - -0.3
693,393 - -0.6
693,399 + 0.9
693,416 - -0.1
693,442 + 0.8
693,553 + -0.2
693,789 - -0.5
693,820 + -0.2
693,839 - -0.3
693,974 + -2.1
694,002 - 0.6