Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1984

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1983: 10351 - K07213 ATOX1, ATX1, copZ, golB copper chaperone, at 670002 to 670488 10351 mRNA_1984: 10352 - Hypothetical Protein, at 670630 to 671905 10352 mRNA_1985: 10353 - Hypothetical Protein, at 672578 to 672870 10353

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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669,788 - 1.3
669,929 - -0.2
669,932 - -0.4
669,942 + -1.5
669,943 + -0.1
670,816 - 10352 mRNA_1984 0.15 -1.5
671,007 + 10352 mRNA_1984 0.30 0.1
671,440 - 10352 mRNA_1984 0.63 -0.1
671,566 + 10352 mRNA_1984 0.73 0.1
671,679 - 10352 mRNA_1984 0.82 1.5
671,735 + 10352 mRNA_1984 0.87 -0.7
672,009 + -2.7
672,154 + 1.9
672,366 + -0.6
672,737 + 10353 mRNA_1985 0.54 -0.4
672,887 + -0.5