Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1958

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1957: 10325 - K02984 RP-S3Ae, RPS3A small subunit ribosomal protein S3Ae, at 607981 to 609583 10325 mRNA_1958: 10326 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 610306 to 612524 10326 mRNA_1959: 10327 - Hypothetical Protein, at 613200 to 613373 10327

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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609,854 - 2.3
611,195 + 10326 mRNA_1958 0.40 -2.1
611,218 + 10326 mRNA_1958 0.41 -0.6
611,304 + 10326 mRNA_1958 0.45 -0.3
611,585 - 10326 mRNA_1958 0.58 0.8
611,654 - 10326 mRNA_1958 0.61 0.7
611,859 + 10326 mRNA_1958 0.70 0.3
612,072 - 10326 mRNA_1958 0.80 -0.1
612,347 - -2.3
612,365 + 3.1
612,645 - -0.0
612,667 - -1.2
612,806 + -0.3
612,821 + -0.6
613,127 + 1.0
613,434 - 0.3
613,443 + -0.0