Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1920

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1919: 10287 - K11340 ACTL6A, INO80K actin-like protein 6A, at 513454 to 515296 10287 mRNA_1920: 10288 - Hypothetical Protein, at 515602 to 517203 10288 mRNA_1921: 10289 - KOG4373 Predicted 3'-5' exonuclease, at 517842 to 518810 10289

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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515,533 + -2.7
515,539 - 0.4
515,810 - 10288 mRNA_1920 0.13 -0.5
515,954 + 10288 mRNA_1920 0.22 1.0
516,274 - 10288 mRNA_1920 0.42 0.7
516,825 + 10288 mRNA_1920 0.76 0.9
517,127 + -2.4
517,400 + 1.9
517,416 + -0.0
517,456 + 0.6
517,484 + 1.7
517,496 + 1.1
517,509 + -1.8
517,511 + -1.5
517,520 - 0.9
517,526 - 0.3
517,533 - -0.1
517,540 - -0.2
517,541 - -1.1
517,553 - 0.4
517,606 - -2.6
517,738 + -0.2
518,026 + 10289 mRNA_1921 0.19 -3.0