Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1850

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1850: 10218 - K00311 ETFDH electron-transferring-flavoprotein dehydrogenase, at 368575 to 371026 10218 mRNA_1851: 10219 - BLAST cell wall surface anchor family protein [Moniliop..., at 371748 to 376200 10219

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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367,649 + 0.4
367,654 - 0.2
367,655 + 0.2
367,671 + 0.8
367,693 + 0.3
367,713 + -0.0
367,717 - -2.1
367,726 + -0.1
367,728 + -0.0
367,747 - 0.0
367,748 - -0.4
367,755 + -0.9
367,757 + -0.2
367,773 - 0.5
367,774 - -0.3
367,779 - -0.4
367,784 + 0.4
367,789 + -1.6
367,895 + 0.1
367,898 - -0.2
367,909 + -1.7
367,909 - -0.8
367,912 - 0.5
367,916 - 1.1
367,921 - 0.2
367,936 + 1.4
367,939 + -0.3
367,940 + -0.7
367,940 - -0.7
367,960 + -1.3
367,962 + -0.1
367,968 - 0.9
367,985 - -0.4
367,994 + 0.2
367,998 + 0.5
368,031 - -2.5
368,051 + -0.2
368,055 - 0.3
368,064 - 1.1
368,067 + -0.0
368,085 - -0.6
368,109 + -0.3
368,120 - -0.5
368,146 + -1.4
368,407 - 1.0
368,691 - 1.4
368,761 - 1.5
369,010 - 10218 mRNA_1850 0.18 -0.0
369,307 - 10218 mRNA_1850 0.30 -0.6
370,172 + 10218 mRNA_1850 0.65 -1.1
370,188 - 10218 mRNA_1850 0.66 -1.3
370,489 - 10218 mRNA_1850 0.78 -1.6
370,754 - 10218 mRNA_1850 0.89 0.2
370,768 + 10218 mRNA_1850 0.89 1.3
370,915 - -1.4
370,922 - -0.2
370,923 - 0.1
371,044 - -0.8
371,045 - -0.2
371,052 + -1.3
371,052 - 0.1
371,054 + -1.1
371,060 + 0.7
371,060 - 1.0
371,063 + -0.2
371,072 - 1.0
371,073 + 0.0
371,073 - -0.6
371,076 - -0.5
371,077 + -0.8
371,080 + -0.5
371,084 + -0.0
371,089 - -0.2
371,090 + -0.3
371,097 + 1.3
371,168 - -1.4
371,219 + -1.4
371,239 + 0.3
371,253 + 0.1
371,382 + -0.9
371,382 - -1.9
371,383 - 1.7
371,392 + -0.8
371,392 + 0.2
371,394 - -0.9
371,394 - -0.4
371,518 - 0.6
371,528 + -0.6
371,648 + -1.2
371,804 - -0.2